FluPortal.org

[CDC / usable on your site]

The CDC’s Emerging Infections Diseases journal will publish in April a study (PDF file) examining household transmission of H1N1.

The investigators tracked patients in San Antonio, TX, (in April and May of 2009) who had lab-confirmed H1N1. They also recorded any “secondary case-patients” among housemates of the flu sufferers — i.e., people who were (presumably) sickened by their H1N1-infected housemates.

The study concludes that children (people under 18) were “disproportionately affected” by H1N1:

The highest proportion of laboratory-confirmed pandemic (H1N1) 2009 and secondary attack rates occurred in children, a finding consistent with the epidemiology of seasonal and pandemic influenza, where we know children experience higher rates of illness [...] and higher secondary attack rates [...]

It also determines that the “secondary attack rate” (contagiousness) appeared to be lower than for seasonal flu:

The secondary attack rate was 4% for laboratory-confirmed pandemic (H1N1) 2009, 9% for ILI [influenza-like illness], and 13% for ARI [acute respiratory infection]. In general, these rates are lower than for seasonal influenza and lower than anticipated for a pandemic strain [...].

You can read up on the full scope and “several limitations” of the study here (PDF file).

A study published today in the Journal of the American Medical Association suggests that vaccinating kids against H1N1 helps protect their entire community.

The researchers set out to test the idea of herd immunity and the observation that “[c]hildren and adolescents appear to play an important role in the transmission of influenza.”

The randomized, blinded study examined 46 volunteer Canadian Hutterite colonies. Roughly 80% of children aged 3 to 15 in half the colonies were given an H1N1 vaccine. Roughly 80% of those in the other colonies were given a hepatitis A vaccine.

Comparing the two populations, the study determined that vaccinating children against H1N1 “conferred 61% indirect protection against influenza among persons who did not receive the study vaccine.” The overall conclusion:

Our data suggest that a significant herd immunity effect can be achieved when the uptake of vaccine is approximately 80% in clusters in which children and adolescents aged 3 to 15 years are immunized.

The authors also propose that elderly people may benefit more from child-based herd-immunity than from being vaccinated themselves:

Although there were relatively few elderly individuals in this population, the protective effect is likely comparable with or greater than what can be achieved by direct immunization.

Helen Branswell, medical reporter for The Canadian Press, notes that children may not necessarily be the key to herd immunity:

Dr. Allison McGeer, an influenza expert at Toronto’s Mount Sinai Hospital, questioned whether the effect was due to the fact that Loeb’s team vaccinated kids, or just to the fact that they vaccinated a sizable portion of the population of the colonies randomized to get flu shots.

The New York Times piece about the study is here. The National Institute of Allergy and Infectious Diseases press release is here.

I have been thinking about systems and tools that could assist public media stations plan and launch websites in crisis scenarios. This website, FluPortal.org, is built on Wordpress, and I have been wondering whether a centrally hosted Wordpress MU installation could serve as a public media publishing platform when stations need a website up and running in a matter of hours. So I was intrigued when we came across a project using Google Sites to assist local governments to rapidly deploy websites in emergency situations.

Local governments face many of the same resource limitations that public media outlets do — namely too few web developers and IT infrastructures unable to handle large surges in traffic. The government of Santa Clara County, home to California’s Silicon Valley, ran into trouble with its website when H1N1 first emerged. The County’s website was overwhelmed by visitors searching for swine flu information and it quickly collapsed under the strain. The Social Innovation and Entrepreneurship Program at Stanford University (the school is located in the County) offered its assistance and helped the County publish its H1N1 pages on the Google Sites platform. Google Sites is basically a hosted wiki that allows users to build websites without any html or coding experience. And with Google’s redundant server infrastructure, sites hosted on the platform should be able to handle any large spikes in traffic.

The new Santa Clara County presence on Google Sites was a stable, straightforward warehouse of H1N1 information, but the default templates provided by Google made it somewhat difficult to navigate. Santa Clara officials and the Stanford team saw a need to create a custom template to meet the needs of communicating large amounts of information and improve the user experience.

The Stanford team contacted Bolt|Peters, a San Francisco design firm, to help construct custom templates to serve the emergency response needs of local governments like Santa Clara County. The results are two Google Sites templates — one for public health scenarios and another for more general emergency needs. You can read about the details and approach that went into the planning of these templates on the Bolt|Peters website.

Google Sites public health template

These templates have been made available for anyone to use on Google Sites. They could be a good option for public media outlets that need to get a site up fast when a crisis hits. It took me less than 5 minutes to launch this test site and place the FluPortal logo in the header. The templates provide a visual layout and page structure as well as plenty of pre-populated content and links that local stations can edit and customize as they see fit.

It must be said that Google Sites has a number of limitations (to name a few: limited html control and no CSS editing), but I am impressed with these emergency templates and by the ability to get a website up and running in a matter of minutes. I’m not entirely convinced that Google Sites can serve as a crisis response platform for public media at large, but the work by Bolt|Peters and the Stanford SIE team highlights important elements of crisis communication and preparedness that we should all be thinking about.

H1N1 virus [CDC / (usable on your site)]

I’ve been wondering for some time why seasonal flu is apparently being suppressed by H1N1. Much of the reporting I’ve seen notes the fact but doesn’t seem to get to the bottom of why it’s happening. Is that because doctors and public-health officials themselves aren’t sure? Are there at least plausible working theories?

This Washington Post article hints at one possible factor:

When a person is infected with one respiratory virus (such as rhinovirus, which causes colds), the chance of catching a different virus (such as flu) declines greatly. Part of the reason is that the first infection provokes what’s called “innate immunity” — a flood of interferon and other cellular hormones that defend the body in a general way without specifically targeting the invader. That protection can last weeks, breaking chains of transmission and slowing a flu epidemic.

A similar form of interference occurs between strains of flu, which is one of the reasons there’s been almost no “seasonal flu” in recent months. The strains circulating last season and still occasionally found this season — H3N2, other forms of H1N1 and influenza B — have all been outcompeted by the upstart H1N1.

In fact, even if there isn’t a third wave, the new H1N1 may well spell the end of one or more of the families of flu virus that have been circulating for decades. That’s what’s happened in previous pandemics, at least.

The H1N1 family arrived in 1918 with the Spanish flu. In the 1957 pandemic, the new virus was in the HN2 family; it drove all H1N1 strains to extinction. In 1968, the new virus was an H3N2. It spelled the end of the H2N2 family, which disappeared. H1N1 returned in 1977, apparently the result of an accidental release from a laboratory in Russia or China.

Have you seen/heard/read any good pieces about intra-flu-strain competition? It seems central to H1N1’s story arc at the moment. The questions about H1N1’s dominance — and the possible answers — could be interesting to keep in mind as you continue reporting on swine flu and seasonal flu.

The CDC has just released new numbers on H1N1 — estimates of cases, hospitalizations, and deaths from April 2009 to mid-January 2010.

This CDC chart summarizes the data:

[CDC]

Click here to find the data broken down into helpful bar graphs. Also to learn how CDC compiles its estimates.

We blogged recently about a Pittsburgh-area study that suggests roughly 63 million Americans were infected with H1N1 in 2009. This estimate — although based on a methodology completely different from the CDC’s — falls in the mid-range of the CDC estimates. (Note: the CDC numbers include data for two extra weeks in January 2010.)

[Voces de la Frontera / cc (usable on your site) / Flickr]

A study (PDF file) released in February by the Institute for Women’s Policy Research suggests that the lack of paid sick days in the private sector increased the spread of H1N1.

Some of the study’s interesting findings:

• “The vast majority of public sector employees receive paid sick days, but two of five private sector employees have no access to paid sick days.”
• “[E]mployees who attended work while infected with H1N1 are estimated to have caused the infection of as many as 7 million co-workers.”
• “The data suggest that more than 90 percent of public sector employees, but only 66 percent of private sector employees, took time away from work when infected with H1N1 [...] implying that many more private sector employees felt that it was necessary to attend work while ill.”
• “[T]he drop in absence rates between October and November was twice as steep in the public sector as it was in the private sector, suggesting that contagion was less common in the public sector.”

The study goes on to propose that “similar patterns of absence” might be “found among children and students” depending on whether their parents “have access to paid sick days to care for family members.”

(Our usual disclaimer: we can’t vouch for the study’s methodology or results; we offer it up as something you might be interested in reporting on.)

[Update 4 March 2010: This is an issue that public-health experts have worried about throughout the H1N1 pandemic. New York Times article from November 2009 here and WNYC report from September 2009 here.]

As the H1N1 pandemic emerged in the spring of 2009, many media organizations — both commercial and non-profit — were facing immense financial pressures. “Unpopular Science,” an article that appeared in The Nation last summer, argues that the economic crisis of journalism threatens the quantity and quality of science and health coverage.

It’s no secret the newspaper industry is hemorrhaging staff writers and slashing coverage as its business model collapses in the face of declining readership and advertising revenues. But less recognized is how this trend is killing off a breed of journalistic specialists that we need now more than ever–science writers…who are uniquely trained for the most difficult stories, those with a complex technical component that are nevertheless critical to politics and society… [E]ven in places where you’d expect it to hold out the longest, science journalism is declining.

Does this argument extend to public media? Public radio and television have long prided themselves on providing science and health reporting that contains substance – not the gee-whiz info-tainment reporting that pervades commercial media. But public media has not been immune to the economic downturn. National producers and local stations alike have been forced to cut staff and reduce spending. But is this hurting our science and health coverage?

Bill Hammack is a professor of engineering at the University of Illinois and a frequent public radio contributor – both at his local station WILL in Urbana, and to national programs like Marketplace. Hammack agrees that fewer dollars to go around has the potential to lessen science and health coverage. “I see the Nation article as pretty accurate. It’s a case of hard numbers. There’s often only one science reporter at any news organization. If that position gets cut – there goes your science coverage.”

But Hammack doesn’t see it happening yet, and thinks public media science and health reporting will weather the economic storm. He points to the continued commitment from NPR to an active and robust science desk as well as audience demand for — and interest in — scientific news and ideas. It’s much harder to cut programming the audience values. “Public radio and television audiences value reflection and analysis. They desire context. That’s exactly why science reporting by public broadcasters is so strong when compared to commercial media.”

Connie Walker, the General Manager at WUNC in Chapel Hill, is also cautiously optimistic for public media science and health reporting. Walker mentioned that loyal listener support during the recession is a public media positive that commercial media can’t share in. “Corporate underwriting is down here, but our listeners have really showed great support during our pledge drives.”

WUNC has a full time health reporter on staff and, until recently, the position was funded by a foundation grant. When the economy went south, the funding was pulled and the station had a decision to make. WUNC kept the health reporter position and folded the cost into their general operating budget.

Walker says, “We maintained the science coverage because we feel it is a valuable part of our service and something our listeners have come to expect.” WUNC’s listening area includes a number of universities in the Research Triangle region of North Carolina. “We not only have an audience that is interested in science, but also local stories to cover.”

Although the station has been able to maintain its science coverage, it hasn’t been easy. Due to general budgetary pressures, the station has deferred filling a number of open positions and had to trim overall spending. Walker says, “We’re more fortunate than most, but the staff is feeling it. We’re asking them to do more with less.”

Have you noticed any decrease in the quality or quantity of public media science and health coverage? Does it remain a part of your station’s local coverage?  Let us know in the comments.

SAFER (Station Action For Emergency Readiness) is an NPR-NFCB initiative to help pubmedia stations prepare for emergencies. It’s offering a session on emergency readiness plans at the Community Radio Conference in June. Here’s the full announcement from SAFER’s Ginny Berson. (Read more about the SAFER project here.)
__________________________________________________________________________________________________

SAFER — Your Station in an Emergency
9:00AM – 2:00PM, Saturday, June 12th, 2010
35th Annual Community Radio Conference in St. Paul, Minnesota
Richard Dillman, SAFER Manual Writer and KWMR Transmitter Engineer

Hurricanes, fires, blizzards, chemical spills, floods, earthquakes — is your station ready to provide critical public service in a time of critical public need? SAFER — Station Action for Emergency Readiness — is a joint project of NFCB and NPR, funded mostly by CPB. The SAFER project has created a detailed guide for stations to develop their own emergency readiness plans, plus digital tools for station websites.

This Intensive is for stations that have started work on their plan. It will be very interactive. We will work with plans from a variety of stations — different sizes, different kinds of markets. We will workshop the plans, help you solve problems that have you stumped and help you move forward.  

You will have opportunities to pick the brains of and share ideas with people from other community and public radio stations. Regardless of where you are in your planning — as long as you have begun — we encourage you to attend this Intensive and take advantage of the best thinking of the SAFER team and stations working through some of the same problems.  

Who should attend this Intensive? The staff person who is most involved with and responsible for developing your station’s emergency preparedness plan.

This Intensive is supported by a grant from the Corporation for Public Broadcasting.

Although the registration fee for the SAFER (Station Action for Emergency Readiness) Intensive is only $50, we know that for some of you the cost of getting to St. Paul, staying in the hotel, etc. will be prohibitive.  

We are able to offer 3 scholarships, each worth $1000, to 3 stations so that they may attend the Intensive (and the Community Radio Conference, if you wish). The scholarship application can be found here.

Ginny Z. Berson
Vice President and Director of Federation Services
National Federation of Community Broadcasters (NFCB)
510 451-8200 ext. 305
1970 Broadway, Suite 1000
Oakland, CA 94612
www.nfcb.org

When the World Economic Forum convened its annual meeting of high-powered business leaders this winter, it offered a panel examining the pandemic vulnerability of companies dependent on the global economy.

Here’s one statistic it cited to make people sit up and take notice. (It’s not clear whether the numbers refer specifically to H1N1 or to any pandemic.)

[A]lthough 60% of CEOs believe the threat of a pandemic is real, only 22% have an emergency plan and only 27% are working on developing one.

Among the key points it raised:

The interconnected nature of the global economy is likely to result in unexpected effects from a pandemic. A company may find that a disease halfway around the world stops it from receiving critical parts or materials needed for its own manufacturing.

To stress the importance of desigining a pandemic plan ahead of time, the panel cited examples of two Mexican companies navigating H1N1’s first wave. The first company weathered it well because it had a pandemic plan in place. The second one had “to suspend operations for nearly a month and ran a significant loss” because it apparently had no pre-existing plan. The panel emphasized that it’s virtually impossible to design an effective plan once a flu pandemic is already underway:

[O]nce a pandemic starts, the flood of conflicting and often misleading information is likely to dramatically increase the difficulty of making executive decisions and communicating them to employees. As a result, it is crucial to have a contingency plan already in place.

The full summary of the “Prepared for a Pandemic?” panel is here. To read our post highlighting what companies can do to prepare for pandemics — what steps they can take to ensure “business continuity” — click here.

[Disclaimer: We're featuring the following study and estimate as interesting food for thought. We can't vouch for their accuracy; you would need to do your own reporting to evaluate that.]

Two different assessments of U.S. immunity to H1N1 have emerged recently. The first suggests the number of Americans infected by swine flu in 2009 (roughly 63 million). The second estimates the number of Americans who currently have immunity to H1N1 (somewhere roughly between 150 and 165 million).

Ted Ross [U. of Pittsburgh]

Assessment #1: A new study published in PLoS Currents: Influenza estimates the number of Americans who were infected with H1N1 in 2009. (Read our post about PLoS — the Public Library of Science — here.) The lead author is Ted Ross, an associate professor of microbiology and molecular genetics at the University of Pittsburgh.

The study looks at levels of antibodies to 2009 H1N1 in Pittsburgh-area residents. (Infection with a virus stimulates antibody production, which then confers immunity.) It examines blood from “846 persons that ranged in age from 1 month to 90 years of age.” The samples were taken from “hospital and clinic patients in mid-November and early December 2009.”

It’s possible that some people with antibodies to 2009 H1N1 got them from the vaccine rather than infection with the virus — but “the timing of the sampling relative to vaccine availability in Pittsburgh suggests that these samples are likely from a largely unvaccinated population during the peak of the second pandemic wave.” In other words: the data probably approximate the number of people actually infected by H1N1 in 2009.

Here’s the study conclusion in a nutshell:

21% of persons in the Pittsburgh area had become infected and developed immunity. Extrapolating to the entire US population, we estimate that at least 63 million persons became infected in 2009. As was observed among clinical cases, this sero-epidemiological study revealed highest infection rates among school-age children.

Ian York [Michigan State University]

Assessment #2: Ian York, an assistant professor of microbiology and molecular genetics at Michigan State University, recently offered his best educated guess of the number of Americans now immune to H1N1 (on his blog Mystery Rays from Outer Space). As he puts it, there are three ways in which someone could have acquired immunity:

They could have been exposed to a related virus, some time in the past, and have developed a long-term immunity. They could have been infected with [H1N1], somewhere in the first or second wave. Or, of course, they could have been vaccinated.

He collects the available data for each of those categories — emphasizing that “[t]hey’re more or less approximate” — and concludes that:

• Over half the US population as a whole is now immune to the new [H1N1].
• As many as three-quarters of the elderly and two-thirds of the children — the most important populations as far as flu is concerned — may be immune.
• Between a third and about half of this immunity was due to vaccination.

To find York’s full table of high and low estimates — broken down by age group — click here.

Why is it useful to know what percentage of the population may have immunity to H1N1? As the PLoS study puts it, it “provides valuable information about the likelihood of a possible third wave and may be useful in decision-making about immunization strategies.” Or as York writes, the “level of immunity” that he calculated “is probably enough to impact virus transmission drastically.”